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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs140336797 chr5:96306314 A/AT ERAP2 chr5:96211643-96255420:+ 0.94 11.18 1.91E-15 Box Plot
ACC rs140438107 chr7:97408490 C/T TECPR1 chr7:97843936-97881563:- 0.84 5.38 1.83E-6 Box Plot
ACC rs140462465 chr8:71725070 G/A XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs140508989 chr6:86207947 TG/T SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs140534483 chr14:74340021 AAAAG/A LIN52 chr14:74551499-74667938:+ 0.55 5.5 1.17E-6 Box Plot
ACC rs140581554 chr12:31196633 TTTTG/T DDX11 chr12:31226779-31257725:+ 0.74 6.49 3.26E-8 Box Plot
ACC rs140591640 chr16:50385734 GGT/G CYLD chr16:50775961-50835846:+ 0.59 5.38 1.82E-6 Box Plot
ACC rs140752350 chr7:76348565 C/T POMZP3 chr7:76239303-76256578:- 1.2 5.86 3.15E-7 Box Plot
ACC rs140842396 chr2:114460693 AT/A DDX11L2 chr2:114356613-114358838:- 0.76 5.77 4.37E-7 Box Plot
ACC rs140958157 chr7:72251122 T/TA TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs141048845 chr20:44389153 A/AC WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.31E-8 Box Plot
ACC rs141123331 chr5:96251950 AC/A ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs141191229 chr7:76328029 G/A POMZP3 chr7:76239303-76256578:- 1.08 5.81 3.86E-7 Box Plot
ACC rs141652077 chr13:28241136 GCTCC/G PRHOXNB chr13:28552243-28562774:- 0.45 5.56 9.43E-7 Box Plot
ACC rs142042965 chr6:86258706 AG/A SNHG5 chr6:86370668-86388454:- 0.68 5.29 2.52E-6 Box Plot